Acta Chimica Sinica ›› 2001, Vol. 59 ›› Issue (11): 1925-1931. Previous Articles     Next Articles

Original Articles

维甲化合物与维甲X受体相互作用模拟及QSAR研究

郭宗儒;易翔;王敏敏;褚凤鸣   

  1. 中国医学科学院药物研究所.北京(100050)
  • 发布日期:2001-11-15

Molecular modeling and QSAR studies on the interaction mechanism of retinoids binding to RXR

Guo Zongru;Yi Xiang;Wang Minmin;Chu Fengming   

  1. Inst Mat Med, Chinese Acad Med Sci.Beijing(100050)
  • Published:2001-11-15

Retioid X receptors (RXRs) play a critical role in the regulation of many biological activities and their specific agonists, including oxime ligands, functionally activate both homodimer RXR: RXR and heterodimer RXR:PPAR, the later relates to insulin sensitization and has a potential application in the treatment of type Ⅱdiabeter. Based on RXR and 9-cis-RA complex crystallographic data, interaction between these compounds and RXR are simulated with DOCK 4.0. After minimizing each ligand -receptor complex, from resulting energy and activity an equations is deduced with the correlation coefficient R^2=0.64. Two CoMFA models are built and compared. One model originates from the ligand conformation extracted directly from complex, the other from energy -minimized ligands. The higher significance of the former than that of the later suggests that the conformation from induced fit of receptor be more reliable.

Key words: INTERACTIONS, QUANTITATIVE STRUCTURE ACTIVITY RELATIONSHIP

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