Through genome mining, a type II polyketide synthase (PKS) gene cluster was identified within the genome of Streptomyces sp. YINM00050. This gene cluster exhibits a high degree of similarity to the biosynthetic gene cluster responsible for the production of alnumycin, a benzoisochromanequinone (BIQ) compound. Nevertheless, no BIQs were isolated from the fermentations of the wild-type strain YINM00050 using various media. Subsequently, the global regulatory plasmid pSH152-tRNA-Asp-AUC was introduced into the wild-type strain, thereby generating the mutant strain YINM00050- tRNA. The subsequent fermentation of this mutant strain enabled the targeted isolation of BIQs. Moreover, a novel anti-tumor compound, alnumycin E, was identified.