Acta Chimica Sinica ›› 2007, Vol. 65 ›› Issue (6): 481-488. Previous Articles     Next Articles

Original Articles

2',3'-二脱氧-2',3'-二去氢鸟嘌呤核苷构象稳定性的理论研究

何冰1, 薛英*,1,2, 郭勇1, 鄢国森1   

  1. (1四川大学化学学院 成都 610064)
    (2四川大学华西医学院生物治疗国家重点实验室 成都 610041)
  • 投稿日期:2006-06-23 修回日期:2006-09-22 发布日期:2007-03-28
  • 通讯作者: 薛英

Theoretical Study on the Conformational Stability of 2',3'-Dideoxy-2',3'-didehydroguanosine

HE Bing1; XUE Ying*,1,2; GUO Yong1; YAN Guo-Sen1   

  1. (1 College of Chemistry, Sichuan University, Chengdu 610064)
    (2 Key State Laboratory of Biotherapy, West China Medical College, Sichuan University, Chengdu 610041)
  • Received:2006-06-23 Revised:2006-09-22 Published:2007-03-28

The DFT (B3LYP/6-31+G**) method was used to study the conformations and isomerization of the isolated and monohydrated 2',3'-dideoxy-2',3'-didehydroguanosine (D4G) molecules in gas phase. The effects of one-water molecule on relative stabilities, conformational parameters and nature charges of D4G were analyzed. The results indicate that there are 8 stable conformers for D4G in gas phase. The conformer d4g-2 is the most stable form of all conformations in gas phase. The relative stability order is as follows: d4g-2>d4g-1>d4g-5>d4g-3>d4g-6>d4g-4>d4g-8>d4g-7. The computational results are in good agreement with the available experimental ones. The addition of one-water molecule did not almost change the order of the relative stability and increased slightly the energy barriers of conformational isomerization of D4G. Hydrogen bonding played an important role in D4G conformations.

Key words: 2',3'-dideoxy-2',3'-didehydroguanosine (D4G), conformational stability, density functional theory, solvent effect