Chin. J. Org. Chem. ›› 2006, Vol. 26 ›› Issue (05): 648-652. Previous Articles     Next Articles

Original Articles

N-[2-(4-甲基)嘧啶基]-N′-2-硝基苯磺酰脲的合成、晶体结构、生物活性及其与酵母AHAS的分子对接

王建国,马宁,王宝雷,王素华,宋海斌,李正名*   

  1. (南开大学元素有机化学研究所 元素有机化学国家重点实验室 天津 300071)
  • 收稿日期:2005-05-12 修回日期:2005-11-07 发布日期:2006-04-28
  • 通讯作者: 李正名

Synthesis, Crystal Structure and Biological Activity of N-(4-Methyl- pyrimidin-2-yl)-N′-2-(nitrophenylsulfonyl)urea and Its Docking with Yeast AHAS

WANG Jian-Guo,MA Ning,WANG Bao-Lei,WANG Su-Hua
SONG Hai-Bin,LI Zheng-Ming*   

  1. (State Key Laboratory of Elemento-organic Chemistry, Elemento-organic Chemistry Institute, Nankai University,
    Tianjin 300071)
  • Received:2005-05-12 Revised:2005-11-07 Published:2006-04-28
  • Contact: LI Zheng-Ming

N-(4-Methylpyrimidin-2-yl)-N′-2-(nitrophenylsulfonyl)urea has been synthesized and characterized by elemental analysis, IR and 1H NMR spectra. Single crystals of the title compound have been obtained and determined. The crystal belongs to triclinic system, space group with cell parameters: a=0.54159(1) nm, b=1.1533(3) nm, c=1.1857(4) nm, α=83.907(6)°, β=81.048(5)°, γ=77.637(4)°, V=0.7126(4) nm3, Dc=1.572 g/cm3, Z=2, F(000)=348, R=0.0659, wR=0.1217. In the crystal structure, an intramolecular H-bond was formed be-tween a nitrogen atom of the heterocyclic ring and a neighboring hydrogen atom bonded with a nitrogen atom to connect the urea bridge. In vitro inhibitory activity against yeast AHAS has been determined and the inhibition constant Ki was (2.48±0.35)×10-7 mol/L. Molecu-lar docking was used to dock the crystal structure of the title compound to the active site of yeast AHAS. It was found that the resulting conformation was similar to sulfonylurea herbicide in complex with AHAS and the biological activity was predicted reasonably well by the program. This study will provide assistance and guidance to further understand molecular structure of sulfonylurea and its herbicidal activity and to design new compounds.

Key words: synthesis, sulfonylurea, crystal structure, molecular docking, biological activity